| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38550 | chr3R 4526703–4528807 (2104 bp) | hb, Cks85A |
      active |
posterior endoderm AISN, hindgut AISN, gap | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | posterior endoderm AISN | 4 |
| 4-6 | procephalic ectoderm AISN | 2 |
| 4-6 | hindgut AISN | 4 |
| 4-6 | gap | 4 |
| 4-6 | posterior | 4 |
| 7-8 | posterior endoderm anlage | 3 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 4 |
| 11-12 | brain primordium broad | 3 |
| 11-12 | ventral nerve cord primordium broad | 3 |
| 13-14 | brain broad | 3 |
| 13-14 | ventral nerve cord broad | 3 |
| 15-16 | brain broad | 2 |
| 15-16 | ventral nerve cord broad | 2 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0001180 | hb | 3160bp downstream | BDGP FlyBase iFly |
| FBgn0037613 | Cks85A | 11925bp upstream | BDGP FlyBase |
| FBgn0037612 | CG8112 | 11952bp upstream | BDGP FlyBase |
| FBgn0266242 | CR44937 | 14795bp downstream | BDGP FlyBase |
| FBgn0037614 | CG8116 | 15262bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
catagatttcgcttcggtcccggtttgttttggtcaggtaagaccttcgattaacaatgaaagtagctggaaaatcgcgagaaacttcgaaagacacacaaagatacaatatctatgagtctaatggtcattagagcggtgcgctctacatacaattgtaccagccgtcttgtttgaagcctaaaaaacgtcgcaaaaaacacacttccgcgtaagacatcccatttctgtggtccgatcgtaaaatatttagttttttatgaccaacggtgcgggcaggtagctggctgccgttttttgtgcgcgacctcaaccctttcacccattaagaaaaaatcgcatcctgtgagtgtccttgcccgtttccctcgaaacggcccacaatttgtgtgctttgcgttttctcctctctttttgtttccacctaatgtcggcgtcattgtcttctttatgacgcctcggttgtttcttttttatggtgtcctttgtcctttgagcctcgttgcacggccaaatccctacttcctcaaccctttggcggacgagaaagttgctaggaggagaacgggttaagcgaaaactccattgcactttttacaagccgcgatcttcttggaattagttttggtcattaggcgaaagggttaatttcgattttggctctcggtgggtttactgagtgaattcaatgggctaaggcgagtaaagggttatactgtttttacattttactacttggaaaatactgaagaacttgtaggaaaaatttccagcacttttaaaagccatatataactttatgaatatgaacttcaaatgtaaaaacctgaaagtgacatgtagttattttaaggtccttgaaaatgatcatcgtctaaaatttcttttttttaaataatttttaaaatatttttttgatagcatacgaagtatttaaaaatgtgaacagattaaacacattaaatttataaaagtaaatacaacagatttagcatagaaataaaaatcattttaatgttccgtccataagtaacggtcgtggaaaattcttgaaaatcccacaaattatattcgatccctttggccgaacatttggtgcgattacattcgtaattcgctggaaattaaggccactaagtcgccagcgaaatgaattcggacattgggcattggacaaatgtaaaaaggactctagagccccgaccattgcaatggtccattgttgagcgtccgaaagatctgaaaaccaaacccaaaccaaatcccgagcttaggcaatcggcattgggaaataagcgccaaatattctaccccccactccaaaaacgagcattccgctcacccaccccatagagatccttggacgcaggacgatgtgccgtctaatcagtccacattttcacactttcgtgacccctgcggcgctacagatgcgtcgatcgggggttggcccctggccattggtcagcgtaaaacaaagtagagtaaaaataaaataaaaatataataaaattgggaacgcgcgccagcgctctgatcctgaccccttgtcagcgtcagccagaggttaaaattaatgcgaatatgttgatgtgcggatgtgcggggagaaattgcatcaattcggggtcacggctaagacgccttaaggagagctgtcagttcacagggcacacatataggggtggctggggtcaaatttatggctcgacattgaaaactgaaacagtcgagcgaaggatttttgcagagcgggactcggcgaaatttgcgctccattgtttagcatgttgtgaaaaatggttcgattcggtgcgaaattggctccggaggtggggtcattccggtttagagcgattttaattgaccattggctgaccctcacccgtaaccgggtcgcctgacctttttccgtcttgacatttgtgcaaatgcctggccgctgctacacatttaaataatttttcattgccagccaggtttgtttttattgcaaatggcatttaattgttgacccctgagtttcccactcgagcgtatggcaaaatgtaacgtatttctcgtcaacggcagctgaaaaattctgctcattttcctgcccaact
PCR verification status
Line was not verified.