| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38600 | chr3R 4611226–4613342 (2116 bp) | Pif1B, Pif1A |
      active |
dorsal epidermis subset, brain anlage subset, ventral nerve cord anlage subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | ventral ectoderm anlage | 2 |
| 7-8 | procephalic ectoderm anlage | 2 |
| 9-10 | brain anlage subset | 3 |
| 9-10 | ventral nerve cord anlage subset | 3 |
| 9-10 | dorsal epidermis anlage subset | 2 |
| 11-12 | brain primordium subset | 3 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 11-12 | dorsal epidermis primordium subset | 2 |
| 13-14 | head subset | 3 |
| 13-14 | ventral epidermis subset | 3 |
| 13-14 | dorsal epidermis subset | 4 |
| 15-16 | dorsal epidermis subset | 3 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0046874 | Pif1B | overlapping | BDGP FlyBase |
| FBgn0261015 | Pif1A | overlapping | BDGP FlyBase |
| FBgn0053189 | CG33189 | 4716bp downstream | BDGP FlyBase |
| FBgn0053191 | CG33191 | 5582bp downstream | BDGP FlyBase |
| FBgn0037630 | Ir85a | 9180bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
aaacaatttccgtgctggcttagatgccaaacaaaactaaaagagactccagcacacatagttggccaacatcgctagcttggctctgagcgaactcaagtcgggttccaccgaatggctcaattcattcataaacaaccaagccaagtgagtcactcgttcgagtggattcgcaaactggtcttcgagtgaatcgtgctcagtggtgggggtgccgtttgcctaccttatcgctatcatcttccagctcgagtatgcgaaactcaaggagttcattctgctccctcagttcgctggcctcgtcctccaagctcgactgcatctcttccagctccttgatgcgctgcatcagctccccgatctgggcctgcttcttggccctgcttatggccgccttttccgcggcatccagctcctgtttcatcagctgcacctccgtctgcaggcgttcgttctccttttggtacatttccgcttccttttgcaacttgtccaggtcctgcagctgcaagaaaacgggggtggatttgattagaatctaaaggaaacggttctagaaacgatgggaaaactatgtcgaaaacaatcttcagttctgcgaaacattctgtctcacaagatattccttttgaaactcaaccaatagttacttttaacataatatctatttatgatgcatataaatagtaagaggaatataggtcctcttacttaatttactataatttatatgttataattataattttgatctatttcatcaaaatcaaaataaaaaaaaatctattgtttgaaagcaaacatgtataaagagttatcaatatgaaatcgtaagactattaactaagagatcttgctttgggttcctagttaagatagatcgttaaacacggactatcattaatcaaatctattcaaagcaaacttctcatgccaaaaatttgatggacttgtgatgtattttaaaaacccagctttatgtaggtccatctcttggcaaagagattccggtacttactgtttgccaaatcacgccgctgtcggatccgctggatggcggctgcgggctgatggagggcggggccgaggacaaggccgagtccgtgtccgaattgggatccttgggaaggcagggagagcggggttaatcgaatgccagatttcgacagaatttctatgccatgactcactcaccttcgacttggctactgccggatggctgtggctgtggctatggcagttactgcctaccagcgtcgtcatccaagtggtggccctcatctcgtcgggggccctcatccgtgtaggagcatcatccaatccattcggctgactgctcttcattgttgtgcgcatctcgagcgctgatttatgtgcatttttcgtattgttgattagctcaatgttcttgagttgggttatctgcgggaaatggatggggaaaaattagaaaatgtcgtgccatagttacatttattcaccacctattcaccatcactctctatcactccatttacccacgttttcttcgggcgacctggcccagaatggacaaagcaattaacaaaagaatctgttttttatctgctgttcgtggagcgtgtttgtggcatatgctatataaagaggggggcattgaagaacgaagaactttgaaaagaacgctccgctttgcggtatgctctttacatgtgtgttaacagttatgacttgatttcttgccacagacacacttttcgcttaaaaagcgcccaatcattactatggacaggtacaggttgcttttaatccggataatgggggtaccacagtgggtcccagaagtgggttcaatgacacggtcgagagatcagagcggtcggcaaaggtgcgtcttaatcgcagattagctgggccaaggcaccggcctcatgcacatccaaatccacagccacatccagtgtagcaacaatgatcctggtcgtgcatcacgacactccacgcactattgagtttaccattcaaaagatttcgctttatcgccgggtcgcatcacgactttcatggtcacgatgccatccatctggccagctgtcagctaattagcctctaagcccaaagccaacacaactcaactg
PCR verification status
Line verified as correct.