| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38780 | chr3R 4969149–4971389 (2240 bp) | pum, CG11997 |
      active |
head mesoderm anlage, head subset, brain broad | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | head mesoderm AISN | 3 |
| 7-8 | head mesoderm anlage | 4 |
| 9-10 | head mesoderm anlage | 3 |
| 11-12 | head subset | 4 |
| 11-12 | brain primordium subset | 2 |
| 11-12 | ventral nerve cord primordium subset | 3 |
| 11-12 | visceral muscle primordium subset | 2 |
| 13-14 | lateral epidermis subset | 3 |
| 13-14 | brain broad | 4 |
| 13-14 | ventral nerve cord broad | 4 |
| 13-14 | visceral muscle subset | 2 |
| 15-16 | ventral nerve cord subset | 4 |
| 15-16 | brain subset | 4 |
| 15-16 | visceral muscle subset | 2 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003165 | pum | overlapping | BDGP FlyBase iFly |
| FBgn0037662 | CG11997 | 34090bp upstream | BDGP FlyBase |
| FBgn0037661 | Ada | 77125bp downstream | BDGP FlyBase |
| FBgn0037660 | beag | 78350bp downstream | BDGP FlyBase |
| FBgn0037659 | Kdm2 | 80183bp downstream | BDGP FlyBase |
UCSC snapshot
Sequence
tccgctatacgcaaacatacacacacgtacatatagataggtacatagaatatggccatcgaacgtttttcgtacttgcctgcaacttgtcagtttctgcacaaagaccatcaatttatttagttttattatctgcacacgcagtgtggagagttcatagatggggcggtggtgtgtgtttttccgaaccaaaattcttgttctttctatattggctcagagcttctattttgtagtcgttttgctggccattttttgttttcttccttttgtttacgctctgcacgcaatgcataatacaacacaaaaaaggaaaaaaagggaaaattgtttgttgcaagtgtcgtaccccttttctccccaaaacaaaaaaatatatataaaaaaaaaaacaatggagtgaaaaaaaagaatatcttgacactttatcgttagccaaaaactagcgcagcgtaaacaaaagacaagcgatgggcgaaaagtggaggcaggcacaacatgacacgaggggcgtggcatgtgggcggggggcatggcaatgtaaggttttggcattttcgcgcttggcgttaaattcccctgacagctataaaattgcattttagagcagcacacagcacacaacagtgcagagaagtcaaaaccaaagtgataggaaggaagacaggaaggacgaaaggaaagggcacgcagcggatacaacaatgtatctatgtatctaataaatagttattgccgatgtgcaacagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacagctacggcgaagtagcaagagcaagaagaacaaaattgatattcccccgaaagcaaaagtgcgacatcattatataaattgtgcggtggctggccaaagtgagcatcatatgttttctatctgtatctatcagatacactagccgggtggcttggctttcctctaagtttgaagtgatttcacacacatgttttccccaaagcaacttttcctccctctcattttcctctctgtcaacatgaccacaaaatgtttcacagctgtgcgcgaagggaaaacgaataaaaagaaaaaaaaaagaaagaaagaaaatatctgagagaacgcgggggagtttccccctggccatttgtcattgatggagaatatgggtatcgggggagttcgatcggaggaaaaacaaacagaaactcgtgcacgtgacactgaaatcatatttatctgatgcaccactggaaaatttattctagcagcgcagcaaaaaaaaatccgtctcaaataatcttttaatgtggccaaaatgtatatttcattgattgaatatttatagggtattaaatacaattattggacattgtattatcgagaagtaaattaaaattcatttcaaacgaaagatatcccttgtggcatgcactctcattaaattataacgcatgacgaccaattatttgtgtttttaaatgttactttttgtttccatatcgttatttcggtgttcctcatataattgagaaaaagaattactaatgctacacaaatagcaattccacaactgttttataacgccatagaaatgtgttctatccccttggggtttccatttcaatatgccttacacaaattgattcgattgcaatctttgagtgagtgaatttttatgagacatcatccgagctctgtgctcgctgttctacgtcacacacgagggaagattttccggtagtggattttagttatttctccataggcctgccggcagcctggagtccttgcgataacagtgccacatgacacgtgtctatgccacgtgtgtgtgtgtgtgaaggcccagaaagggttagaaaccgacggccgcctcttcattttatttcatttaatttttctgtggtggctttcactaccgtaccacttatgttgagattacacgcttgtcagcgaaggcgtttcgcccacaaaatactcggaaaagggttttttggggtggtggatattctcgttggaagaccgataaaatgagcaatatgttgaagttaccgaagttagataagaagtgtacataaaacaggagttgcaagcacttgaggaggagtttagaaatgcttttctattattattaaatttatatactagccatatggataattaatttatttatttatattttcatcctattcattctctgcgcatagactaaacatttttggcagctcattcaactttgctca
PCR verification status
Line verified as correct.