| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38795 | chr3R 4995940–4998158 (2218 bp) | pum, CG11997 |
      active |
proventriculus, hypopharynx primordium, telson | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | brain primordium subset | 1 |
| 11-12 | ventral nerve cord primordium subset | 1 |
| 11-12 | hypopharynx primordium | 3 |
| 11-12 | telson | 3 |
| 13-14 | head subset | 3 |
| 13-14 | ventral nerve cord subset | 1 |
| 13-14 | anal pad | 2 |
| 13-14 | brain subset | 1 |
| 13-14 | proventriculus | 4 |
| 13-14 | midgut subset | 3 |
| 15-16 | midgut chamber | 3 |
| 15-16 | proventriculus | 3 |
Whole-slide images
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003165 | pum | overlapping | BDGP FlyBase iFly |
| FBgn0037662 | CG11997 | 7299bp upstream | BDGP FlyBase |
| FBgn0000412 | D1 | 67865bp upstream | BDGP FlyBase |
| FBgn0260935 | ird1 | 70539bp upstream | BDGP FlyBase |
| FBgn0037664 | CG8420 | 76431bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
ctggtgcgtgtgactgactggattgcactgctgcactgcagcgagctattgtatcgagggttggaccttaatagttttataattgattctgatatgatttggcaaaatgagaataagaaaaaaaatcgaaaagcaaaggtacagcaaaattgcaacttaaaattcgatttacagttcatttgcagagggtggtgggaaattaaagtgaaaattcaaccgaacgggggttgcattgaaacgaatttaggggacggctcttaacggttttaaatgcaattttccaatttactactgaataagtttgttgttctgtgcaaaacttgtcttcactttcgtcggctcatttcaatagtacgctgattgctttaatttagcaccgaattgcagtcagcatgttaccctaatagacagcgacatgattaaagccaagacaaacaaactcgcaatggggcgcagacacgtgcaaaatgagttaacaatttgcatgcaaatctgcgccgacaagtcgcctaatgttaacccattaaggccgtgaaaagctgtcgtcgctgccctgaaatcaaattgtcgccgtcgccgcctcgtcattgcagattttccagttcgtttcgcgccaacgtgggggaaaaaaaagtcacattagatgacttcccagcgatatcataatgggcgaaaatctgcgcattttttcttccctcctaatgatgcttgaaatcgttaggttgaaggggtatttttcacttcaatcatttctaaattaaaaaaattctcagatacatagtgacagttaagaagttgaatagtacttatttatttctttttcaaggtaagctaaatttttaattagttttaaatttgtttctatcatttattgtcttatttttaagtatttgtaattactgcatcaatcaaggtggcggtgtgaaaatgcttcagacattaattggaatcgccctgaggcggcggagcaaacaaaccagagttgtcaactccatctctatatatccatccatccaaccagccccgccccaaaaaaaccaaaaacaaaaacaaaaagcccaagtgttccgccccgccccttttcacacatcagtgctatcatcgcgtcttcttctacatctgcagcttcggcttgttctgcttcttctacatgtcggcaaagttttttgatatcatgagcgtggttaggtgtgctgggcgcaaaaagagcaggggaaggagaaggcggagtggggaaaaggggtgcgaggccactgaggtcggagtgagtctacaaaagtgtcacagcataaaagcacaatctatcccctaccaaaccccttttgataccaatgtggttcttgcgctgtgtccactctgaaaagtgtgagaattatgtggactgtggacacggtggaaaaggaacacccaaacagacacaacaaaaaaatccacacacacacacacactgagcattcaaccattgccgtgtcattcacaccgagacaaactccaaacgctatgtcaacttatcttaataccctgtaaaacatgcttaaacttacaaagtacataaagtaaaccgatcattaagtttttagtcacagaataagtgttagattttaaacacgttcacataaaaacaatgtaccataagcctgaagatattttgtcataaaactaagaattaaatacagctattataaaattaaatataatatatagaactcagaaaatatactaaaatatatttctcattttcctgattgaatttttgactgtttaggaaatataaatatatttcaagcatgttttcagcgccaatttagaaagagtacataaatccccttaactaatagactttttctaaccagcttctagtatgtttttttttttgaccgacgagaaagatagaggacaactttttcgtgctgagttttcgcaaactcatttatgtagttctcgcttcatgtttacttaaagttcagctcgagtgttgtttttacaaattgttatccactgtgtgtcggttttgggtgtgtcaatgtatgcgtggctgtgcggatatgtgggtggttttttttttttttttggtgggcggcagacgaaaataaaagcagacagtttgggagtcactgtggcaatttcagttcaggagtgactccaaattcagtgtcggctttcggctttggtgttgaccttagtttttctttcaccattctccccgtctcccttcattt
PCR verification status
Line verified as correct.