| ID | Coordinates* | Neighboring genes | Expression (4–6, 7–8, 9–10, 11–12, 13–14, 15–16) |
Strongest annotations | Order |
|---|---|---|---|---|---|
| VT38816 | chr3R 5034571–5036745 (2174 bp) | pum, D1 |
      active |
ventral nerve cord primordium subset | VDRC |
Annotations
| stage | annotation term | intensity |
|---|---|---|
| 4-6 | not active | 0 |
| 7-8 | not active | 0 |
| 9-10 | not active | 0 |
| 11-12 | ventral nerve cord primordium subset | 2 |
| 13-14 | not active | 0 |
| 15-16 | not active | 0 |
Neighboring genes
| gene ID | gene name | distance | links |
|---|---|---|---|
| FBgn0003165 | pum | overlapping | BDGP FlyBase iFly |
| FBgn0000412 | D1 | 29234bp upstream | BDGP FlyBase |
| FBgn0037662 | CG11997 | 29752bp downstream | BDGP FlyBase |
| FBgn0260935 | ird1 | 31908bp upstream | BDGP FlyBase |
| FBgn0037664 | CG8420 | 37800bp upstream | BDGP FlyBase |
UCSC snapshot
Sequence
agcacacacacaagcacacaaacatcaaggccatgggaaaggtggcgctgtcaatagcattttccggtgggtggtggtgatgttgctgagaaatgaaacctttcggcagttggggatgatatttcctgcgggcgtgaagacaaatgattcggctatctgacaaactgttgccatctccttaatgatgtcagcatgttaattaaaggcaaattatttgctaaactcttcgtcttttcgcttctttttcgggttggattcgatgaggaatcacttgttcttttcgtgtgctttgaatttttcccatatgaggttgagttaaaagttaagaagtgttaattggttaaccaaagttactggcggtggttgaaattgattaattggaagggaaatttcgttggcatcgagattagtggatcaattttaaacaaataggaagtctgtgagtagcaatgtccttaaatcgcacatcaaactattccatattagcaattccctacactaagccattaaagaggcggatattgcaaggacactgatgataagcgcatatgctgtgaagcatgcatcagggcttcgcttaattaatgtctcggctaccaaatttgcgacgccccgccacttgccacccacccacgtatccacacccacacccgaccccccctttcgtagccgatgtcaactatttgccacttactaattagcatttgcgtgtccacacaaacttcaagggaagacaacgaagacggagtgtctgaggcatggagtaaccgctaattgggctttattggcggtaaatgtcaagtgacggcattggatgacactttccacccactcactgccaacgattttcactccatcggtagaacgccccgtgcccaaaaacaacaaccacttgattatggctttcgccagataataggagttgaatattggggacgtagaagcaatctatcgttgtccatggcaacggaaaagtctttgcagaggaaagttgcctaaggaagctaaaggtaatcggaccggctataaaacatataaaaaagatcaaaactttaatgttgcaaagcaaacttaagcttcaaacttccaggagatcaattggtttaaaatatatacacatatatataaaacttatggaaaatatgattattaaatatgatttactctttagctcttcagacacgtatttctatatgcaattatgttaatcgccactttatctaaaactaaatcataccaattgcatctgcttttaaaattccaaaatttaaccaaccaaaatgcacgttcgcaatggcattgtatgcatttaattgaatccttttttcaatcatcaaaacgtagccatcatagcagccattaaaacttgaaatgcaacgagaacgcattttgaacaaaatgtgagcaggcctgaattgaaatgaaacactgcccatggacaattggaaattaatttactaagtgccatacacacatgcgtaatgagctatatgctttttgtgccaattaacgcttaattaattgctatattaatatatgccagtgccgaaaaggggatggtaaactgcagaggggtgcattgcgaatcagcggcggcaaggagcaaagcagatgctgcattttcattgatttaaatgcatttttatgcaaattttcgcactttggcgtagtagtaaattattcacgacgaatttgaacactgaatgcaagtggcattcgtgctgctatcccatacctattagttaatgccatctgttaaatctcaattgcctgctgacctaaaactatgtgactgtattcgaataaaaaatatagaattatttatatatcgaaatgcataaattaaacacttgaaaagacacaaaactattgctgaaatttgcataatgcgtacacaattatttgctataatctgatttatttgtttcgttttgcatttcgattatgcatttaaattatgttatttttaaattaacctttaaaattgtgcacatacaaaaaaacatctttccttttaactttctgatttactaaactaaagtacctgaagacaagaaaaaccacagtaatccgtaacttttgaaatcaattaaacagactttcagatcagagctgaaataagcagtcaaaaaagaccaaaagcaatcatccgattaagccgcgttgaagacaaca
PCR verification status
Line verified as correct.